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marylin monroe
Showing posts with label epigenetics. Show all posts
Showing posts with label epigenetics. Show all posts

Fit Kids = Smart Kids, Creatine & Muscle Repair, Epigenetic Transfer From one Leg to Another. Plus: Fat Effects of Anti-Psychotics, Larger Muscle = Greater CNS Impact, Rhodiola a Natural Opiate, Hawthorn for More & Thicker Hair

It's never too early for your first push-up ;-)
"10" is this week's SuppVersity figure of the week. Ten as in "ten push-ups" which is the mean number of push-ups the 12 year-old boys and girls from the Coe study you can read about in one of the items of today's news mash-up aka "On Short Notice". I am honestly not yet sure what to make of it, it's not as bad as what I had expected based on a couple of observations I have made as of late, but it still goes to show you that you cannot take the most fundamental feats of physical fitness for granted, when it comes to pre-/peri-pubertal kids in today's sedentary society.

Now, while I am still trying to make up my mind I would suggest we take a look at the actual outcomes of the study. The 10 push-ups were after all only part of the subject characteristics and not the reason Coe et al. actually conducted their study.

Fit Kids are smart kids - Strength and cardio both matter!

You can hardly start your career as a physical culturist too early, there are simply way too many benefits from giving your body the nutrients and the exercise it needs and therefore it is actually not surprising that conclusion of a recently published paper in the Journal of Sports Medicine and Physical Fitness reads:
"Students with the highest fitness level performed better on standardized tests and students with the lowest fitness level performed lower in class grades" (Coe. 2012)
Interestingly enough, this effect was associated with both cardiorespiratory fitness and strength, which brings us back to yesterday's news about the PGC-1 alpha isoforms (read the comments as well) and the detailed follow up I just decided to post on the whole matter, tomorrow.
Figure 1: Spearman rank correlations and achievements cores in terms of grades (0:min, 80:max), test scores (% of max) and combined (% of mean of all kids; data based on Coe. 2012)
Since this is the first study of its kind to investigate all five established parameters of health-related fitness (HFR), it should also be mentioned that body composition, flexibility and muscular endurance did not show the same statistically significant correlations the scientists observed for cardiorespiratory endurance and muscle strength in the kids (52% boy, 48% girls; all from the same age group ~12 years). Now, it would be nice if the people who design the curricula would keep that in mind, when they add junk after junk to the syllabus and regard sports and being active as an unnecessary diversion from the constant intellectual drills.

Creatine can do much, but it can't accelerate skeletal muscle repair after a workout 

The results of a recent study from the Department of Kinesiology and Physical Education at the Wilfrid Laurier University in Canada (McKinnon. 2012) , in the course of which  a total of 27 male (n = 15) and female (n = 12) participants between the ages of 18-24 completed an experimental training protocol with either
  • 2x creatine monohydrate (20g) and a carbohydrate supplement (20g) in order to blend consistency and taste (CREA),
  • 2x 40 g of maltodextrin only in 500mL of water (MALTO), or
  • no supplementation at all (control)  
The supplement was consumed over a 5-day period (check out the "Pharmacokinetics of Creatine" posts and you will learn that this dosage regimen is an unnecessary overkill - even if you insist on "loading") after which the participants participated in a baseline strength test that was followed by a muscle-damaging protocol that consisted of maximal force eccentric contractions:
Suggested read: "Creatine a Proven Non-Anabolic Agent: It's the Increase in Training Intensity that Will Give You the Hypertrophic Edge (read full story)
"Subjects performed 60 maximal eccentric contractions that were divided into 6 sets of 10 repetitions, with a 45 second rest period between repetitions.  The velocity of eccentric contractions was varied between sets (2 at 75°/sec, 2 at 90°/sec, and 2 at 120°/sec). This protocol has been used in previous studies and has been shown to be an effective means of inducing skeletal muscle damage (Cooke et al., 2009). The researchers also provided verbal encouragement to the subjects to help maintain maximal effort throughout the protocol." (McKinnon. 2012)
After adequate rest, the first of 5 post-tests was conducted. The results (figure 2) clearly show that despite the overall greater force recovery in the creatine group, the relative rebound after an allegedly higher drop was seen in the MALTO group while it was minimal in the no-supplement group.
Figure 2: Force recovery and muscle soreness at 0h, 24h, 48h, 72h, 96h in the control, maltodextrin and creatine groups subsequent to a 5-day suppelemtation regimen (nothing,  2x 20g crea + 2x20g malto, or 2x40g malto (McKinnon. 2012)
Overall the scientists are yet still right, when they say that "creatine supplementation failed to significantly influence indices elbow flexor muscle damage or rate of muscle recovery following eccentric muscle contractions." After all, there were no statistically significant differences between either the muscle force loss and rate of recovery or muscle soreness (small figure in figure 2) between the groups - and it is unlikely that this would change after the initial 96h of recovery.

Additional suggested reads:
  • DHEA Blunts Muscle Damage During 5 Days of Combined Endurance, Strength and HIIT Training in Young Men (read more)
  • Speed Up Your Regeneration and Propel Your Gains by Taking a HOT Bath Bath 2-Days Before Arduous Workouts (read more)
  • Overtraining, Inflammation, Insufficient Repair: Scientists Shed Some More Light on the Counterproductive Triad of Ups & Downs in Testosterone, IL-6, IL-10, COX II & Co (read more)
Ah, I almost forget to mention, you see that the mean isometric peak torque is not even back up to 100% after 96h, right? Remember that whenever you decide that it would be a good idea to do "yet another set of forced reps". It is possible that the seasoned strength training veteran you are, you recover faster than the subjects in the study at hand who had not trained for at least 4 months, but it stands out of question that eccentric forced reps will increase the time you need to regenerate, let alone to see what we are all striving for, i.e. super-compensation effects (see suggested links on the right for more on "doing too much" and faster recuperation after workouts).

Working out one leg changes genes in the other leg as well 

The progress research in the area of epigenetics, i.e. the changes of gene methylation and thus activity in response to nutrition, exercise and other variables you can easily control is actually amazing. With the recent publication of a study into what you may call epi-genetic cross-reactivity further contributing to our insights into the relations of the local and system epigenetic effects of exercise and their respective metabolic downstream effect (Catoire. 2012).
Figure 3: Graphical summary of the study design and selected results (Catoire. 2012)
As you can see in my graphical mini-summary of the study design (top) and outcomes (middle + bottom) in figure 3 there was a whole lot going on... and that despite the fact that I did already spare you a complete page with font 10 lists of genes that changed (you do have the numbers, I guess that shall suffice) and paired them in groups. What's funny is that, when it's all said and done, this does yet again tie in to yesterday's news on PGC-1 alpha 4 - how? Well, let's hear (or read), what the scientists have to say in the discussion of their results:
"Many of the observed exercise-induced changes in gene expression are likely part of an acute stress response related to disturbances in homeostasis elicited by exercise. The most highly induced genes in the exercising leg were all members of the NR4A family, a subgroup of orphan receptors within the nuclear receptor superfamily. NR4A1 and NR4A3 have been reported to be upregulated shortly after acute exercise and during recovery in rat, pig, and human [24], and this upregulation likely occurs locally by contractile stimuli. This finding was confirmed by our study in which we observed an upregulation of NR4As in the exercising, but not in the non-exercising leg. NR4A transcription factors are also known to be induced by adrenaline and noradrenaline. Circulating adrenalin and noradrenalin levels were increased in our study but must exert only a minor effect as NR4As were exclusively induced in the exercising leg,. [...] NR4A1 and 3 are thought to play a key role in regulating energy metabolism and early adaptation. [...] The results may imply that NR4A family might play an important role in the regulation of metabolic responses after exercise." (Catoire. 2012)
The study at hand does thus add yet another puzzle piece to the image of the crossroads of the endocrine (from one tissue to the other) and intracrine (in this case in the exercised muscle) effects of energy and metabolic changes on the one hand and muscular contraction and local stress, on the other hand. As closely interwoven as they are, we are now - thanks to the novel gene essays - able to see through the complex network, understand what exercise does to our physiology and can then, in the next step, come up with ways to modulate these effects for our own benefit.

It is clear that this is not going to be easy and the presence of two "mutants" among the 12 relatively old  study participants (52 year; "old" only for studies like this, of course!) suggests that any cookie cuter solutions are probably about to fail. I mean, if you have got two guys out of twelve where the overall magnitude of gene expression changes in the exercising and non-exercising leg were very similar, it is more than likely that you would see these and other anomalies very frequently; and each of them would have to be considered if you wanted to design he optimal workout (nutrition and supplementation) regimen for an individual (good news for personal trainers, if you know what you are doing, no sciency compendium is ever going to replace you ;-)

In rehab, doctors and therapists use the neurological stimulation a stiff leg receives, when you move the other while looking into a mirror that fools you into believing that the stiff leg would be moving as well.
In that it does not even really matter, whether the observed anomalies were actually due to genetic differences or, as the scientists suspect simply the result of unconsciously performed isometric contractions in of the non-exercising leg. The ensuing neuronal activation could have brought about similar effects as they are observed (and intended) during mirror therapy (see image on the right), where an involuntary neural stimulation of the muscles in a stiff leg occurs, when the mirror fools you into believing that you actually just moved your stiff leg, or other body part, when it was in fact only the counter-lateral limb that moved (note: one of the latest reviews of the literature says about its efficacy in stroke rehab would facilitate the recovery of "motor function, activities of daily living and pain" and could be recommended "at least as an adjunct to normal rehabilitation for patients after stroke"; cf. Thieme. 2012).

With the effects of neural stimulation, which has already been shown to induce gene expression changes via increased calcium concentrations in the skeletal muscle as well as via other mechanisms (Long. 2007; Kanzleiter. 2009; Chin. 2010, we do thus have a third player in the epigenetic / protein regulatory exercise orchestrate that does now consist of a metabolic, a contractile / stress mediated and a neuronal component. As far as skeletal muscle hypertrophy is concerned, the local expression does still appear to be the major determinant of adaptation and thus growth - to train your left leg only expecting that the other will grow due to "bystander effects" is therefore almost as hilarious as skipping leg day with the lame excuse that your legs would grow from training your biceps ;-)

On ultra short notice

With that I'll call it a day as far as the detailed posts are concerned and invite you to come back tomorrow, when I am going to pick up on this discussion in a detailed post on the Roa study on PGC-1 alpha 4, muscle growth, myofiber composition, strength development, workouts and the whole megillah. For the time being here is a bunch of unsorted other things I considered newsworthy:
  • Anti-psychotics increase lipid synthesis by depressing it!? What sounds totally counterintuitive, is actually the main message of an editorial to the latest issue of the Journal of Lipid Research, in which Skreede, Steen & Ferno argue that a paper by Canfrán-Duque et al. clearly suggests that the obesity and hypercholesterolemic effects of 2nd generation anti-psychotics such as clozapine, risperidone, and ziprasidone are brought about by the counter-regulatory upregulation of cellular lipogenesis in response to their suppressive effect on cholesterol synthesis. (Skreede. 2012)
  • The greater the muscle group you work, the larger the impact on the central nervous system will be (Rossmann. 2012) -- In the end everybody will know that intuitive, back and leg days are the hardest and most taxing to the whole system. Based on a trial involving eight young men who performed exhaustive large (cycling – BIKE) and small (knee extensor – KE) muscle mass dynamic exercises at 85% of the modality-specific maximal workload, scientists from Salt Lake City did now provide further experimental evidence that supports the notion that the CNS tolerates a greater magnitude of peripheral fatigue and likely a greater intramuscular metabolic disturbance when the pertinent afferent signaling comes from small vs. large muscle groups . 
  • Rhodiola Rosea turns out to be an opiate (Lee. 2012).-- In a recent study scientists from the Chi-Mei Medical Center in Yong Kang, Tainan City, Taiwan were able to show that the popular but questionable (as far as the significance of its effects are concerned) adaptogen rhodiala decreased the systolic blood pressure of spontaneously hypertensive rats. Intriguingly the effect was blunted by the administration of the selective opioid μ-receptor antagonist, cyprodime, but not by naloxonazine, an antagonist specific to opioid μ1-receptor, which suggests that a direct effect on the opiate receptor. Moreover, the level of mood enhancing and relaxing beta-endorphins rose in both wild type and hypertensive rodents (with the effect being more pronounced in the latter)
  • Chinese hawthorn for the hair, not the heart (Shin. 2012) -- I guess if you hear hawthorn or Crataegus you will probably think of its purported beneficial effects on heart health. Now if the results from a recent rodent study are applicable to humans, as well, you will soon have to establish a novel neuronal connection between (Chinese) hawthorn and your scalp, or rather the hair on your scalp . With its beneficial effects on the initiation of the anagen phase in mice in teloge and the ensuing increase in skin color, thickness of the hair shafts, and density (number and size) of the hair. Oral C. pinnatifida extract (at a human equivalent dose of ~320mg/day) could soon be all the rage among men and women who fear for their superb head of hair.
I think this is enough for today. There is a life beyond the SuppVersity not for you, of course, but for me - so while you head over to the SuppVersity facebook page for even more news, I am going to enjoy Saturday night ;-)

    References:
    • Canfrán-Duque, A., M. Casado, Ó. Pastor, J. Sánchez-Wandelmer, G. Peña, M. Lerma, P. Mariscal, P. Bracher, M. Lasunción, and R. Busto. Atypical antipsychotics alter cholesterol and fatty acid metabolism in vitro. J Lipid Res. 2012 [in press]
    • Catoire M, Mensink M, Boekschoten MV, Hangelbroek R, Müller M, et al.  Pronounced Effects of Acute Endurance Exercise on Gene Expression in Resting and Exercising Human Skeletal Muscle. PLoS ONE 7. 2012; 11: e51066.
    • Chin ER. Intracellular Ca2+ signaling in skeletal muscle: decoding a complex message. Exerc Sport Sci Rev. 2010 Apr;38(2):76-85. 
    • Coe DP, Pivarnik JM, Womack CJ, Reeves MJ, Malina RM. Health-related fitness and academic achievement in middle school students. J Sports Med Phys Fitness. 2012 Dec;52(6):654-60. 
    • Kanzleiter T, Wilks D, Preston E, Ye J, Frangioudakis G, Cooney GJ. Regulation of the nuclear hormone receptor nur77 in muscle: influence of exercise-activated pathways in vitro and obesity in vivo. Biochim Biophys Acta. 2009 Aug;1792(8):777-82. 
    • Lee WJ, Chung HH, Cheng YZ, Lin HJ, Cheng JT. Rhodiola-Water Extract Induces β-endorphin Secretion to Lower Blood Pressure in Spontaneously Hypertensive Rats. Phytother Res. 2012 Nov 28.
    • Long YC, Glund S, Garcia-Roves PM, Zierath JR. Calcineurin regulates skeletal muscle metabolism via coordinated changes in gene expression. J Biol Chem. 2007 Jan 19;282(3):1607-14.
    • Rossman MJ, Venturelli M, McDaniel J, Amann M, Richardson RS. Muscle mass and peripheral fatigue: a potential role for afferent feedback? Acta Physiol (Oxf). 2012 Dec;206(4):242-50. 
    • Shin HS, Lee JM, Park SY, Yang JE, Kim JH, Yi TH. Hair Growth Activity of Crataegus pinnatifida on C57BL/6 Mouse Model. Phytother Res. 2012 Nov 12.
    • Skrede J, Steen VM, Ferno J. Antipsychotic-induced increase in lipid biosynthesis: activation through inhibition? Journal of Lipid Research. December 7, 2012 [Epub ahead of print] 
    • Thieme H, Mehrholz J, Pohl M, Behrens J, Dohle C. Mirror therapy for improving motor function after stroke. Cochrane Database Syst Rev. 2012 Mar 14;3:CD008449.

    Gene-ial or Dan-Gene-rous? Better Make Sure You Are Made For Every Other Day Fasting, If You Don't Want to Ruin Your Glucose + Lipid Metabolism and Become Viscerally Obese

    Yes! I freely admit that I do have a problem with the subliminal "binge and starve" of the popular every other day fast, because it paves the not so royal road to binge eating disorders.
    Only 2 years ago, there was hardly anyone but the followers of Martin Berkhan's "Lean Gains" regimen who knew what intermittent fasting would be. Ironically, now that mainstream is catching on, the hype within the fitness community is slowly abating  - maybe part of the reason is that it's no longer "cool" enough now that your fat neighbor does it ;-).

    It goes without saying that the mainstream version comes without an obligatory exercise component and - what's probably even worse - in the absence of macronutrient, let alone food prescriptions that would make sure that the every other day fasts that are becoming increasingly popular these days become "binge and starve" protocols.

    The every other day fast, a gateway to eating disorders?

    I could probably write a whole article about the potential of feast and fast strategies to function as a gateway to binge-eating disorders, but I know that most of you will discard that by stating: "Pah, that's happening only to the psychologically labile person who can't control his-/herself"... I will argue against that in another article, but I want to let you know here and now, that you could hardly be more off.
    Did you know that eggs can improve the lipid profile of most of us?
    Stay calm! In view of the fact that rodents in the wild-type control group, who had fully functional LDL receptors did not show a similar negative response to the well-meant dietary intervention, the results of the study at hand are hopefully irrelevant for most of you. If you do have friends and relatives with inexplicably high cholesterol levels, you would however be ill-advised to encourage them to battle their problems with every other day fasting.
    Anyway... What this article is actually about is a paper from the British Journal of Nutrition. It was written by Dorighello et al. and has been published online ahead of print. The corresponding study was designed to test the hypothesis that alternate day fasting, which has previously been shown ... 
    • to decrease established metabolic risk factors of CVD and diabetes in human subjects and rodents (Varady. 2007),
    • to reduce the production of liver mitochondrial reactive oxygen in mice (Caro. 2008), and 
    • to increases the lifespan of rodents (Martin. 2006)
    would ameliorate tissue mitochondrial oxidative stress and glucose intolerancr in LDL-receptor knockout mice. The LDL-receptor negative mouse is a common, or rather the scientific model of familial high cholesterol (these are the people who are put on a statin the very moment, they enter their doctor's office).

    What the scientists expected and what they found were two pair of shoes

    I guess you don't have to be a rocket scientists to see what the data in Figure 1 is telling us: In spite of a 20% reduction in energy intake (over the whole week), the rodents in the Dorighello study did not benefit from their every other day fasting regimen (EODF)
    Figure 1: Changes in lipid and blood glucose levels (relative to control on ad libitum diet; left) and carcass composition in % of total weight (right; data based on Dorighello. 2013)
    Accordingly, the Brazilian scientists who had expected that the fasting induced energy restriction, (-20%), alone, should ameliorate the metabolic disturbances in LDL-receptor knockout mice, and reduce their susceptibility to atherosclerosis, had to acknowledge that their clever every other day fasting regimen can have unexpected and, in the last consequence, eventually fatal effects on the heart health of the laboratory mice:
    • Epididymal and carcass fat depots and adipocyte size were significantly enlarged by 15, 72 and 68 %, respectively.
    • Pasma levels of leptin were 50 % higher in the EODF mice than in the ad libitum-fed mice.
    • EODF mice showed increased plasma levels of cholesterol -  total cholesterol (37 %), VLDL-cholesterol (195 %) and LDL-cholesterol (50 %). 
    • The glucose homeostasis of the "EODF mice" also disturbed. The scientists observed a +40 % increase in glycemia and a +50% increase in insulinaemia. In short, the mice became glucose intolerant and insulin resistant.
    • The significant increases in systemic inflammatory markers, TNF-a and C-reactive protein, only topped the list of negative side effects of the every other day fast off.
    Overall this lead to a 3-fold increase in spontaneous atherosclerosis development, an effect of which it cannot be said often enough that it was observed exclusively in the LDL-receptor negative mice.
    Practically speaking... In spite of the fact that the main take home message of the study at hand may be relevant only for those who harbor a certain genetic disposition, I do not recommend a zero calorie every other day fast to anyone - irrespective of whether he or she does or doesn't have LDL receptors  ;-)
    If you are not aware of cases of familiar hyper-cholesteraemia and want to improve your lipid metabolism by fasting and eating clean, I suggest you re-read my previous article about the "Two Day High-Protein, Low-Carb Fast" and try this, or a classic intermittent fasting routine with a 6-8h feeding window to shed some body fat and get in better metabolic shape.
    So what does this mean? The results of the study at hand are exemplary of something regular SuppVersity readers have encountered a dozen of times, already. A fact that vindicates the often-heard, but rarely understood notion that "we are all different". As the study at  hand clearly shows, our gene's and their consequences on our physiology determine not just what we should eat, but also when we shoult eat it. 

    You got to be wary, though! Contrary to what you may read in some shiny magazines and on banners on the Internet, the often advertized "gene type diet" is not even on the horizon, yet.

    Yes, we can (theoretically) identify each and every gene in our bodies, but in contrast to a general LDL receptor dysfunction, many of the more subtle genetic differences are as of yet totally unknown. Any list of foods, or, as this study shows, suggest food frequency rules you may get are up to know about as accurate as the names of the man or woman of your dreams you will get if you follow the friendly advice the music television advertisement gives you and "send an SMS with the keyword 'love' and your name" to a random number. Even for the well-studied APO-E polymorphisms, scientists are time and again surprised to find that their results are not in line with data from previous studies. Contemporary accepted implications, such as "people whose apolipoproteins belong to the APO-E4 class will do more harm than good if they consume larg(er) amounts of fish oil" could thus be as flawed as the idea that only fat can make you fat - likewise the result of premature conclusions that seemed logical in view of the contemporarily available, highly insufficient data, by the way.

    References:
    • Caro P, Gómez J, López-Torres M, Sánchez I, Naudi A, Portero-Otín M, Pamplona R, Barja G. Effect of every other day feeding on mitochondrial free radical production and oxidative stress in mouse liver. Rejuvenation Res. 2008 Jun;11(3):621-9.
    • Martin B, Mattson MP, Maudsley S. Caloric restriction and intermittent fasting: two potential diets for successful brain aging. Ageing Res Rev. 2006 Aug;5(3):332-53.
    • Varady KA, Hellerstein MK. Alternate-day fasting and chronic disease prevention: a review of human and animal trials. Am J Clin Nutr. 2007 Jul;86(1):7-13. Review.

    L-Carnitine Works! Yet, Maybe More Subtly Than Thought: 1.2-5g L-Carnitine Increase Expression of Genes Implicated in Fatty Acid Oxidation, Glucose & Lipid Metabolism.

    Image 1: This is you... well, not exactly. It's rather an animal model of human carnitine metabolis ;-)
    As a faithful student of the SuppVersity it stands out of question that you have read my masterpiece *rofl* on the "Purported Ergogenics" in the "Amino Acids for Super Humans Series". You will thusly be familiar with the inconsistency of the mostly disappointing results of randomized, placebo-controlled trials. Whether it was for fat-loss, for increases in exercise performance or whatever else the producers of respective supplements promise would happen, when you buy and take their oftentimes profoundly underdosed supplements, in the absence of pathological (or severe dietary) carnitine deficiency the observed effects, if there were any, were negligible.

    A soon to be published paper by Janin Keller and other researchers from the Institute of Animal Nutrition and Nutrition Psychology at the Justus-Liebig-University, in Gießen, the Institute of Agricultural and Nutritional Sciences at the Martin-Luther-University, in Halle-Wittenberg, and the Hans-Knöll-Institute, Research Group Systems Biology/Bioinformatic, in Jena (all in Germany, btw.), does now shed some light onto the more subtle, epigenetic effects of l-carnitine supplementation (Keller. 2011).
    Image 2: The calculation of human equivalent doses is a constant (unreliable) pain in my ass - either you don't have the adequate conversion ratio or you do not know how much an animal eats. weighs etc...
    Note: While my calculation (see below) indicates that the equivalent dose of the dietary enrichment used in the study should be ~4-5g, Keller et al. use a different method to calculate dose equivalents that is based on the ~500g of feed the pigs consumed per day. According to their calculation the daily dose of l-carnitine on a per kg body weight base for the piglets (final body weight: 17kg) was 15mg/kg body weight l-carnitine. If we now take a look at our conversion table (cf. table 1), where this specific type of big obviously is not listed, we probably have to divide that by 1.1 to get the Human Equivalent Dose - but since this is for "Mini pigs", we will just leave it with 15mg/kg and would thus have a dose of only 1.2g for an 80kg human being.
    Keller et al. fed a group of 16 male crossbred pigs (body weight at study begin: ~10kg) a standardized diet with a naturally occurring amount of <5mg/kg carnitine. Half of the pigs, did receive additional 500mg/kg carnitine in their feed. In view of the fact that this effectively centuplicated (x100) the carnitine content of the diet, and considering the fact that the average human dietary carnitine intake ranges from ~47mg in men to ~30mg in women (Lennon. 1986), this would translate into an additional dose of roughly 4-5g of supplemental l-carnitine per day for humans. If you buy your carnitine in bulk (currently ~5$ per 100g) mimicking the supplement regimen used in the study would cost you about 25cents a day... but I guess before you do that you will rightly want to know what the potential benefits would be.
    Figure 1: Liver free and total l-carnitine levels (in nmol/g) in growing piglets after 21-days of normal or carnitine supplemented feed (data adapted from Keller. 2011)
    As you can see in figure 1 the liver of the animals literally squirreled the l-carnitine away (this could also be the reason, why most of the previously cited studies saw only transient increases in serum l-carnitine levels and almost no increases in muscular carnitine stores). An increase of +915% in free and +937% in total liver l-carnitine content is - I probably don't have to mention that - more than significant and was not without consequences... consequences of which scientists probably would not have even thought about 10 or even 20 years ago - epigenetic changes of which Keller et al. write:
    we observed that 563 genes were differentially expressed by L-carnitine. This shows that supplemental L-carnitine influences gene expression in the liver of piglets and indicates that at least some of the biological effects of L-carnitine are mediated by altering gene transcription. [...] Gene term enrichment analysis revealed that the most frequent biological processes associated with L- carnitine supplementation were dealing with metabolic processes. This was not surprising considering that the main function of L-carnitine is to stimulate energy metabolism by acting as shuttling molecule for long-chain fatty acids which also enhances the metabolic flux of glucose through the glycolytic chain. This was also confirmed by clustering analysis showing that 6 out of the 10 top-ranked clusters were dealing with metabolic processes. Representative genes from one of these clusters dealing with metabolic processes (carboxylic acid metabolic process, oxoacid metabolic process, organic acid metabolic process) encoded proteins or enzymes involved in cellular fatty acid uptake (SLC27A6, solute carrier family 27/fatty acid transporter, member 6), fatty acid activation (ACSL3, Long-chain-fatty-acid-CoA ligase 3) and fatty acid β-oxidation (ACADSB, Acyl-CoA dehydrogenase, short/branched chain specific), and most of these genes including SLC27A6, ACSL3 and ACADSB were found to be significantly up-regulated by L-carnitine supplementation.
    Moreover, the researchers found that a whole host of genes (e.g. GLUT8, GCK and GPD1 more than 4x elevated) related to glucose metabolism (glucose transport, conversion of glucose into glucose 6-phosphate, and glycolysis, and hexose biosynthetic processes, like gluconeogenesis) and triglyceride metabolic and triglyceride biosynthetic processes were elevated, as well. Taken together this lead the scientists to conclude that the epigenetic changes that were induced by 21 days of (relatively) high-dose dietary l-carnitine supplementation suggest that the "conditionally essential" amino acid l-carnitine
    1. ... exerts its "well-known stimulatory effect [...] on fatty acid β-oxidation" at least partly by stimulating the transcription of genes involved in "cellular fatty acid uptake, fatty acid activation and β-oxidation"
    2. ... has profound beneficial effects on glucose metabolism and utilization, which are mediated "not only by [a genetically triggered] stimulation of glycolysis but also suppression of gluconeogenesis in the liver", and
    3. ... triggers genetic modifications which lead to an "inhibition of glycerolipid biosynthesis and stimulation of lipoprotein secretion and fatty acid catabolism", which contribute to its overall beneficial effects on lipid metabolism.
    Now that you have all the facts, I'll leave it up to you to decide whether those "hidden" genetic changes are worth the 0.25$ (or 0.06$ if you use the 1.2g dose, cf. red box above) you would have to pay for your share of supplemental l-carnitine per day... and by the way: don't ask me if whatever other form of carnitine will do just as well, better or worse. This is a question only a separate study could answer!

      Weightloss Threesome: TV or Sleep, Black Pepper, Ginger, Horseradish or Mustard, PolyGlycopleX (PGX) or Psyllium?

      Image 1: True or false - Is three really better than two?
      Since the On Short Notice columns turns out to be a major success, I decided that I could put out studies in packages of shorter items, on a more regular basis - at least if I stumble across pairs such as those in today's Fat Loss Threesome and have time to compile them in to a comprehensive blogpost. But enough of the prelude, let's get right to our threesome: Television or Sleep, Black Pepper, Ginger, Horseradish or Mustard, PolyGlycopleX (PGX) or Psyllium - What do you think, which of these is will spice up, which will water down your weight loss efforts; and for the bros out there: Can you stack all of them or do they have to be cycled?

      TV Watching and Insufficient Sleep - A Dynamic Duo for (Childhood-)Diabesity

      Image 2: Watching TV eating junk is only part of the equation; what's missing here is the lack of sleep kids don't get, when they watch TV canned with coke and energy drinks all night.
      Facebook friends and followers of the SuppVersity Facebook Channel may be familiar with at least some of the recent articles on the negative impact of TV watching alone and in conjunction with sleep deprivation on the body composition and metabolic health of our children. My personal favorite in this regard is a letter to the editor of the British Journal of Nutrition, in which Travis John Saunders and Jean-Philippe Chaput argue that obesity prevention could be as simple as turning off the television and having a nap (Saunders. 2012). The authors reference a whole host of studies to support their hypothesis that TV consumption and the associated lack of sleep esp. during the early hours of the night contribute to the rise of the obesity epidemic:
      • TV viewing burns energy at a slower rate than most other waking activities and yet still most available evidence suggests that it may be energy intake, rather than expenditure, which leads the scientifically established association between screen time and weight gain, Saunders and Chaput ascribe to several confounding factors such as
      • TV viewing provides opportunities for snacking & food eaten in front of the TV is generally high in calories and low in nutrients (Thorp. 2011)
      • TV commercials reinforce the unhealthy dietary habits
      • Sleeping also burns less energy than regular waking activities, but reducing sleep time usually increases, not decreases weight gain, due to
      • increased consumption of high energy, specifically high sugar foods to compensate for the lack of energy (cf. "Fat Content Per Energy Drink 0g, Body Fat Gain Per Energy Drink 18g!")
      • decreased energy expenditure through fatigue-related reductions in physical activity and lower basal metabolic rates
      "Pah, that's guesswork!" If that's what you think, when you hear about Saunders' & Chaput's hypothesis, you may want to take a look at another recently published study by Calamaro et al. who report that (1) children who consume caffeinated beverages (not even directly before bed) get 15min less sleep and (2) children with 3 technology items in their room got 45min less sleep (Calamaro. 2012). Significant correlations with BMI were yet present for the intake of caffeinated softdrinks, only!
      In other words, although both are characterized by physical inactivity TV watching and sleep "exert opposing influences on energy balance and body weight" - an observation which leads the authors to humorously conclude that
      Reducing TV viewing and/or getting adequate sleep require little in the way of resources or expertise, and may therefore be more sustainable than more traditional interventions focused on diet and exercise. If having a good night's sleep truly is better for your weight than watching TV, this would be a lifestyle modification which may be substantially easier to implement than adopting a new diet or exercise routine. This change of focus is certainly worth consideration, right after a short nap. (Saunders. 2012)
      Assuming that you did not already take your nap or have exceeded your daily combined TV + Internet screen time, you will probably also be interested to hear that another recently published paper by Caroline Fitzgerald et al. reports that "a child who watches 18 hours of television (per week) at 4.5 years of age will by the age of 10 have an extra 7.6 milllimetres of waist because of his or her habits" (Fitzgerald. 2012). Does not sound much, but you know how things go, proper with 5, chubby with 10, obese with 20 and dead before 40... you don't really think your kid could have invested those 3.5 years(!) of he would have been sitting in front of his television screen into more productive, more healthy and more sustainable hobbies, do you?
      Implications: The best way to avoid TV & sleep related weight gain and / or propel your weight loss is to start planning your screen time instead of simply planting your (fat?) ass on the sofa, whenever you have a minute to spare.
      1. Go to one of the free online TV magazines and create a schedule pick only those shows you really feel you have to see and try to reduce your screen time by 20min every week
      2. Never eat in front of the television spontaneously, if you have a planned, healthy meal, make sure you don't have more on your plate than you plan to eat(!), and don't have anyone tell you cannot enjoy the SuperBowl or the latest Hollywood blockbuster without chips, popcorn and a soft-drink. 
      3. Get yourself a time-limit switch program it so that it the TV has no power, after 9PM, which is when you will be grabbing your new blindfolds and earplugs and head to bed, weeknights.
      If you stick to those simple rules and use your iPhone or iPad only for your obligatory daily class at the SuppVersity you will not just improve your physique, you will also live a couple of extra years! After all, scientists from the University of Queensland calculated in 2011 that "every single hour of TV [i.e. one hour per day] viewed after the age of 25 reduces the viewer's life expectancy by 21.8 min" (Veermann. 2011)!

      Mustard, Horseradish, Black pepper & Ginger - Useless Thermogenics

      Image 3: Although it's more effective than horseradish, black pepper or ginger It would probably take more hot mustard than your tummy can handle to get ripped to the shreds.
      If you are already not watching TV and getting enough sleep (see above) and still don't look as lean and jacked as you would like to, a group of Danish researchers has some suggestions on which supplements you should not waste any money on (Gregersen. 2012): Mustard, horseradish, black pepper and ginger! While the latter two did not exert any measurable effects on either diet induced thermogenesis or energy intake (obviously the intention was to reduce the latter), when they were administered at oral dosages of 1.3 g and 20g, respectively, the addition of 8.3g of horseradish or 21g of mustard to standardized brunch meal did at least have some effects on the 22 young (age 25y), normal-weight (BMI 21.8kg/m2) men in the randomized cross-over study by Gregersen et al.:
      • 8.5g of horseradish decreased the postprandial heart rate and increased the blood pressure to a statistically significantdegree, while
      • 20g of mustard increased the thermogenic response to the testmeal by 14%
      Now, while the former sounds dangerous and the latter as if "Mustard-o-burn (TM)" was just around the corner, none of these statistically significant effects were physiologically relevant. After all, it would take roughly 1 years to shed an additional lbs of body weight from the +14% increased diet induced thermogenesis from mustard (even if that lasted 24/7), because +14% added to 13kcal/h are only 1.82kcal/h. Even if we assume that you eat 5 meals a day this would hardly amount to more than 10kcal/day or 1.5min of light jogging... but hey, we all know how futile calculations like these are - no? Well, then you should check out my "Busting the 3,500kcal Equals 1 Lbs of Fat Loss" post!
      Implications: If anything the use of tons of spices will render your food so unpalatable that you will simply eat less. Aside from those anorexic effects the use of copious amounts of spices, as they would obviously be necessary to illicit significant thermogenic effects, will probably produce more negative than positive (side) effects and could thus even contradict the established beneficial effects of having a "normal" (=tasty) amount of spices in your diet (Kochhar. 2008).

      And in case you still insist on "spicing" up your fat loss regimen beyond the reasonable level your taste buds (and gastrointestinal mucosa; cf. Jensen-Jarolim. 1998) can handle, the topical route as in "Topical Fat Loss: Capsaicin Cream Blunts Weight Gain in Rodent Model and Increases Leptin, Adiponectin, Lipolysis and Fatty Acid Oxidation in Visceral Fat Depots" could in fact be worth a try.

      Viscous Weight Loss Alternatives: Psyllium Seed Gum and PGX(R)

      Now it would be unfair if I left you with "nothing" else but the advice to switch of the TV, get more sleep and refrain from spicy food (unless you eat it simply 'cause you like it). Luckily, there are yet two additional hitherto unpublished FirstView Articles in the queue of the British Journal of Nutrition which do suggest that dietary fibre, viscous dietary fiber, to be precise could make a valuable addition to your no-TV + lots of sleep regimen.
      Figure 1: GI (measured according to ISO 26 642-2010) with and without addition of PGX viscous fiber supplement in 2x250ml water to the 50g carbohydrate meal (Brand-Miller. 2012)
      When you ingest it prior to bread, rice, boiled potatoes, french fries cornflakes or instant outs (GI range 65-84) it, a novel dietary fiber supplement that goes by the ingenious brandname PolyGlycopleX
      (PGX) leads to dose dependent reduction in the GI of a subsequent carbohydrate meals of 16.5% and 31% for the 2.5g and 5g dose of PGX, respectively - or, physiologically speaking, a 15-33% reduction in blood glucose elevations in the 120min after the consumption of the test meals.

      Now that certainly does not sound earth-shattering, but a previous human study has already established that the reduced postprandial glycemia goes hand in hand with increases in PYY expression (Reimer. 2010) and reduced food intake on subsequent meals (Vuskan. 2009). Moreover, earlier rodent studies have established that PGX can improve glycaemic control and protein glycation (Grover. 2011), most probably due to the far-reaching metabolic effects of increased glucagon-like peptide 1 (GLP-1; read more about this incretin hormone in  "Eat More, Burn More and Lose Fat Like on Crack with GLP-1!?") levels.

      Will eating 25g of psyllium /day reprogram your genes to burn not store fat?

      What's even better though is that the last FirstView Article in today's fat SuppVersity news clearly suggests that you don't have to buy InoviBiologic's patented purified polysaccharide supplement that is extracted from konjac, sodium alginate and xanthan gum by the means of a proprietary process the company calls EnviroSimplex®, to benefit from those health and weight loss effects. If the results Togawa et al. observed in their C57BL/6J who were kept on high-fat (40%) diets with or without the addition of 5% psyllium (as psyllium seed gum, PG-200) for 10 weeks translate to humans, the only reason I could see to spend the extra money would be the whopping dose of ~25g/day (0.32g/kg body weight; learn how to calculate Human Equivalent Doses).
      Figure 2: Visceral fat mass and parameters of glucose and lipid metabolism after 10 weeks on the low fat control vs. the supplemented or unsupplemented high fat diet (data expressed relative to control; Togawa. 2012)
      If the results do translate to human beings, you can stomach this amount of fiber without negative side effects and are still able to consume adequate amounts of "real" food, though, the data in figure 2 will probably have you hack "psyllium fibre buys" into google in no time. After all, the profound upregulation of genes involved in fatty acid oxidation and lipid transport Naoyuki Togawa and his colleagues from the Yokohama Corporate Research Laboratories and the Laboratory of Food and Nutrition, Graduate School of Horticulture at the Chiba University in Chiba, Japan, detected in fat and skeletal muscle tissue of their lab animals were not just statistically, but also physiologically significant. So significant, in fact, that the mice who consumed ~148g of the psyllium enhanced high-fat diet before they were euthanized at the end of the 10-week study period did not just gain 10% less body weight than their unsupplemented peers, they also had lower cholesterol, lower triglyceride and above all lower visceral body fat masses than the "control" animals on the supposedly healthy low-fat diet.
      Image 4: Fiber or no fiber - those abs want to be worked out.
      Implications: While ginger, pepper, horseradish and cool are still "hot", dietary fiber is (pun intended) somewhat poopooed upon by many of the "everything mainstream must be wrong" nutrition gurus and fitness enthusiasts. From a scientific perspective, however, it does make more sense to spice your meals up with fiber than with spices that burn away your intestinal mucosa and turn your gut into an open barndoor (cf. Jensen-Jarolim. 1998) for all sorts of things you should better leave where a huge amount of the fiber will go - in the toilet bowl.

      That being said, we need further studies to elucidate if and at which dosages similar epigenetic changes as they were observed by Togawa et al. occur in human beings before making any definite recommendations. For the time being, I will simply repeat my advice to
      1. fill yourself up with fiber-laden veggies and consume a balanced (!) amount of saturated, mono- and polyunsaturated fats from whole foods,
      2. aim for a mild energy deficit (~20%) and a reasonable carbohydrate intake of roughly 700-900g per week; either by low-carbing + refeeding (e.g. 6x 50-75g + 1x 250-400) or a constantly low intake of preferably low(er) GI carbs (don't count carbs from green veggies and co!)
      3. eat at least 20-25g of a complete protein (count only meats, fish, eggs and dairy) with every meal and supplement with protein powders / bars, whenever you have no whole food source with 10+g of EAAs in it at hand
      4. follow a sound workout regimen (e.g the "Fat Loss Support Routine" from the Step By Step Guide), don't do hours of "cardio" in the non-existent fat burning zone and cherish the fat-burning effects of glycogen depleting strength and HIIT workouts without overtaxing your central nervous system
      If you follow 1-4 on 330 of 365 days of the next year you even the ugliest blubber that may still be covering your abs should disappear - and guess what!? All that without patented or non-patented viscous fiber supplements ;-)

      References:
      • Brand-Miller JC, Atkinson FS, Gahler RJ, Kacinik V, Lyon MR, Wood S. Effects of added PGX®, a novel functional fibre, on the glycaemic index of starchy foods. British Journal of Nutrition, 2012; 108, pp 245-248
      • Fitzpatrick C, Pagani LS, Barnett TA. Early childhood television viewing predicts explosive leg strength and waist circumference by middle childhood. Int J Behav Nutr Phys Act. 2012 Jul 16;9(1):87.
      • Gregersen NT, Belza A, Jensen MG, Ritz C, Bitz C, Hels O, Frandsen E, Mela DJ, Astrup A. Acute effects of mustard, horseradish, black pepper and ginger on energy expenditure, appetite, ad libitum energy intake and energy balance in human subjects. British Journal of Nutrition, Available on CJO
      • Grover GJ, Koetzner L, Wicks J, Gahler RJ, Lyon MR, Reimer RA, Wood S. Effects of the soluble fiber complex PolyGlycopleX® (PGX®) on glycemic control, insulin secretion, and GLP-1 levels in Zucker diabetic rats. Life Sci. 2011 Feb 28;88(9-10):392-9.
      • Jensen-Jarolim E, Gajdzik L, Haberl I, Kraft D, Scheiner O, Graf J. Hot spices influence permeability of human intestinal epithelial monolayers. J Nutr. 1998 Mar;128(3):577-81.
      • Kochhar KP. Dietary spices in health and diseases (II). Indian J Physiol Pharmacol. 2008 Oct-Dec;52(4):327-54.
      • Marshall SJ, Biddle SJ, Gorely T, Cameron N, Murdey I. Relationships between media use, body fatness and physical activity in children and youth: a meta-analysis. Int J Obes Relat Metab Disord. 2004
      • Reimer RA, Pelletier X, Carabin IG, Lyon M, Gahler R, Parnell JA, Wood S. Increased plasma PYY levels following supplementation with the functional fiber PolyGlycopleX in healthy adults. Eur J Clin Nutr. 2010 Oct;64(10):1186-91.
      • Saunders TJ, Chaput JP. Is obesity prevention as simple as turning off the television and having a nap? Br J Nutr. 2012 Jun 14:1-2.
      • Thorp AA, Owen N, Neuhaus M, Dunstan DW. Sedentary behaviors and subsequent health outcomes in adults a systematic review of longitudinal studies, 1996-2011. Am J Prev Med. 2011 Aug;41(2):207-15.
      • Veerman JL, Healy GN, Cobiac LJ, Vos T, Winkler EA, Owen N, Dunstan DW. Television viewing time and reduced life expectancy: a life table analysis. Br J Sports Med. 2011 Aug 15.
      • Vuksan V, Panahi S, Lyon M, Rogovik AL, Jenkins AL, Leiter LA. Viscosity of fiber preloads affects food intake in adolescents. Nutr Metab Cardiovasc Dis. 2009 Sep;19(7):498-503.

      Nutrigenomics - "Let Food be Thy Medicine and Medicine Be Thy Food." An Ancient Truth in Light of Fancy DNA Analyses

      Researchers working in the field of nutrigenomics prioritize berries over pills and individuality over "one-size-fits-it-all approaches" - can they also tell us how to "eat away cancer"?
      "Live longer, live stronger"... rings any bells? Anyone? Of course. That's the motto of Super Human Radio. So anyone, who has been listening to the Science Roundup over the past couple of weeks will  have heard it at least once. Now, while the "stronger" part of Carl Lanore's slogan is still largerly under-researched if you asked me, the nutritional angle, which does not appear in the slogan, but is still a major theme of the show is really taking off, these days. Nutrigenomics, i.e. the science of (a) how what we eat determines how our genes functions - keyword: epigenetics and (b) how our very individual genes determine how we're supposed to eat, is really talking off these days. Reason enough for me to invite you to take a peak at what we already know in terms of the modern version of the ancient

       "Let food be thy medicine and medicine be thy food."

      One of the primary objectives researchers in the field have subscribed to is the battle against cancer. No other disease appears to be more suited to the modulating effect of the chemical compounds in foods, which is - and that's something you've heard on the Science Round Up several times, as well, capable of both preventing and inducing the instability of the DNA synthesis and gene expression that's finally causing our cells to play havoc.

      Table 1: Epigenetic roles of nutrition in physiologic and pathologic processes (from Nepomuceno, originally based on Choi. 2010)
      As Júlio César Nepomuceno writes in a recent paper which actually re-instigated my interest in the whole matter,
      "[...t]he nutrients are able to affect the genome and its expression through the synthesis of nucleotides, prevention and repair of DNA damage, or through epigenetic mechanisms including methylation of histones, proteins responsible for chromatin structure that play an important role in regulating gene expression." (Nepomuceno. 2013)
      Now, while all the cells in our bodies share an identical genome, there are many "epige‐ nomes", which are the unique  sets  of  epigenetic  instructions  for  establishing  and maintaining  lineagespecific expression profiles.

      And it is at this cross-roads between the general and the specific where DNA methylation and histone acetylation which can be brought about by the foods we eat an the supplements we take will have more powerful effects than the latest blockbuster drug from the laboratories of Phizer, Merck, Bayer, and co. (Fuji. 2010).

      The methylation / acetylation cycle: The genomic switchboard of your cells

      Against that background, you as an avid listener and reader of SHR and the daily news and articles on the SuppVersity won't be surprised that nutrients that are part of the so-called "methylation cycle" are considered among the most important agents in nutrigenomics. It's their presence, adequate enzymatic conversion and use that ensures the integrity of the genome of each and every cell in your body and once the tightly controlled and constantly operating machinery is broken, cancer and - as more and more scientists believe "premature" aging and other diseases of epigenetic origin can ensue.

      One (not Two!) Kiwi(s) A Day Keeps the Doctor Away. (learn more)
      Despite the fact that the word methylation is tightly linked to all these pathologies, it's actually a completely unbiased process.

      And while this should be self-evident, most of us need tabular overviews like the one to in table 1 to remind ourselves of the critical and for most of us highly beneficial effect folate, for example, had on our embryonic development, or - just another example - the epigenetic roots of the beneficial effects compounds such as curcumin, resveratrol or choline will have on obesity, inflammation or neurocognition.

      In fact, the integrity of our DNA is under constant assault. Simple "mechanistic" errors during the replication process, electromagnetic radiation (from X-Rays to very low frequency EM), alkylating agents, spontanous mutations and the often-heard of reactive oxygen species threaten the integrity of each and every cell in our body leading (in the best case) to cell cycle arrest and apoptosis, in the worst case to mutations, cancer and genetic diseases. Moreover,
      "[...c]urrent cancer models comprise those that are inherited through the germline and represent only  ∼5% of total cases of human cancers. These tumors originate because of mutational events. The remaining ∼95% originate as sporadic events and evolve as a result of exposure to the environment,  which  includes  exposure  to  both  environmental  contaminants  and  dietary agents. The multistage model of carcinogenesis identifies various phases, initiation, promotion, and progression, appears to be influenced by tissue microenvironment and organization." (Nepomuceno. 2013)
      Yet, as frightening as it may see, these threats and the effects specific nutrients will have on their ability to harm us may  be our best chance to avoid cancer, premature aging. In fact, scientists argue that the age-increased susceptibility to cancer may actually be the results of an accumualtion of epigenetic changes, many of which could be ameliorated, if not prevented by dietary nutrients that will affect the profile of transcripts, which may - and this is where things get complicated - yet be modulated by inter-individual differences in our genetic make-up (Miller. ) - so-called polymorphisms, such as the "cancer gene" Carl and I have been talking about in the last installment of the Science Round Up in the context of Angelina Jolie's double-mastectomy (see table 2 for a selection of these polymorphism).
      Table 2:Polymorphic genes, dietary components and cancer: possible candidates (Nepomuceno. 2013)
      Now while scientists have already been successful (or they believe they were) in identifying dietary patterns that are associated with an increased and decreased risk of certain cancers. You have to keep in mind that these associations, as they were proposed by the experts from the World Cancer Research Fund (WCRF) and the American Institute for Cancer Research (AICR) are largely based on epedimiological data and will thus neither include the modulating effects of the said polymorphisms nor have the status of undebatable facts.

      "Red meat will cause cancer!"

      One of my favorite examples is the association between red meat intake and the development of cancer, of which th AICR researchers believe that there was a 15% to 20% increased risk of cancers of the colon and/or rectum per 100 grams of red meat or 50 g of processed meat consumed per day (is that true?).

      Suggested Read: "Meat-Ology: A Brief Glance at the Latest Data on The Link Between Red Meat, Cooking Techniques & Prostate Cancer" - How bad is it?
      If you take a close enough look at the respective papers and don't rely on the mainstream media coverage, exclusively, the American Cancer Society openly admits that
      • the mutagens and carcinogens (heterocyclic amines and polycyclic aromatic hydrocarbons) in meat are produced by cooking meat at high temperatures and/or by charcoal grilling and that 
      • the nitrates/nitrites and salt used to process meat contribute to the formation of nitrosamines, which are known mutagens and carcinogens in animals
      and not "meat per se" are the true - or we should say "most likely" - mechanistic factors involved, here.

      In the end, a similar "most likely" should also accompany the well-accepted conclusion from accumulating evidence on the beneficial effects of a diet that's high in fruits and vegetables after all, diets on the other end of the extreme are notorious for providing sub-optimal amounts of vitamin B12 and could thus also increase the risk for malfunctions in the methylation cycle and the subsequent development of cancer.

      Tea, coffee and the other mainstream polyphenol sources

      Contrary to the associations with vitamins, the influences polyphenols have on our overall and genetic health are actually a comparatively "novel" topic of scientific research. In fact, scientists argue that these common constituents of foods of plant origin and not the previously hailed vitamins are the major antioxidants in our diets. Vegetables and fruits like apple, grape, pear, cherry, and various berries contain up to 200–300 mg polyphenols per 100 g fresh weight and coffee, teas, cereals, chocolate, and dry legumes also contribute to the polyphenol intake.

      Did you know that flavenols are only a subclass of polyphenols? They comprise a large and diverse family of compounds synthesized by plants. Flavonoid subclasses include anthocyanidins in berries and grapes, flavanols in tea, flavanones in citrus fruits, flavonols in onions, flavones in herbs and peppers, and isoflavones in soy.
      In that, the term polyphenol is actually an umbrella term that comprises various powerful antioxidants such as flavonoids and stilbenes, many of which have been implicated in cancer prevention and the promotion human health without recognizable side effects, which are - even in such prominent cases like red wine, which contains a wide range of different polphenols - far from being completely understood. The recently mentioned negative effects of cholorogenic acid supplements on the glucose metabolism of rodents, are another example, where certain molucules - in this case chlorogenic acid - of which we believed that they were responsible for the beneficial health effect of coffee turn out to exert different or even downright hazardous effects, when they are administered in isolation.

      Similar observations have been made for the classic anti-oxidant vitamins A, C and E and as of late vitamin D. Not everything that looks good on paper or works in the petri dish will also work in a complex organism and even fewer things did eventually make the translation from the bench to the bedside.
      Table 3: Selected trials involving "classic" antioxidant vitamins esp. beta carotene (based on Tanaka. 2012)
      For science the disappointment surrounding beta carotene (see table 3) was actually highly productive, Without the conflicting data on the real world effects of foods such as yellow-orange vegetables, green leafy vegetables, orange and yellow foods and all the other carotenoid-containing food items and the negative outcomes in the above cited studies, we would probably still lack an appropriate grasp of what carotenoids actually are.

      A group of chemicals known as isoprenoid polyenes that are found in lipid-soluble form in the  yellow-orange-red pigments in all higher plants and some animals. Scientists further distinguish
        Table 4: Sources, function, and effects of different carotenoids (Tanaka. 2012)
      1. vitamin A precursors that do not pigment such as β-carotene;
         
      2. pigments with partial vitamin A activity such as cryptoxanthin, β-apo-8'-carotenoic acid ethyl ester;
         
      3. non-vitamin A precursors that do not pigment or pigment poorly such as violaxanthin and neoxanthin; and
         
      4. non-vitamin A precursors that pigment such as lutein, zeaxanthin and anthaxanthin. 
      As Tanaka points out, the specific form of the molecules, in particular their stereoisomerism (take a look at your left hand and compare it to the right one and you know what this is ;-) exerts a marked influence on the physical properties.

      Vitamin C is vitamin C, is vitamin C, is ... useless?

      While research on the different types of carotenes has made huge progress and scientists are finally grasping the notion that there is a difference between folic acid and its biologically active cousins, the one on the most prominent dietary anti-oxidant and it's proctetive effects on cancer stalls - with mainly negative outcomes:
      If you add some reactive oxygen species to this mitochondrium, this will trigger beneficial, (mito-)hormetic adaptations, that could be blunted by too many antioxidants. Could be blunted, but what exactly is the latest evidence for the average individual or the corresponding rodent model (learn more)?
      "Regarding the use of vitamin C in cancer patient the results were not promising. In a double- blind study 100 patients with advanced colorectal cancer were randomly assigned to treatment with either high-dose vitamin C (10 g daily) or placebo. Overall, these patients were in very good general condition, with minimal symptoms. None had received any previous treatment with cytotoxic drugs. Vitamin C therapy showed no advantage over placebo therapy with regard to either the interval between the beginning of treatment and disease progression or patient survival. Among patients with measurable disease, none had objective improvement.

      On the basis of this and our previous randomized study, it can be concluded that high-dose vitamin C therapy is not effective against advanced malignant disease regardless of whether the patient has had any prior chemotherapy."
      On the other hand, studies investigating the dietary intake of vitamin C as a part of the natural nutrient matrix ascorbic acid comes with in the vegetables and fruits in our diets (phenols, flavones, and terpenes, beta carotene, selenium), provides at least preliminary evidence that vitamin C intake may be more important for prevention of lung cancer than beta-carotene (e.g. Kromhout. 1987). The necessary amount of vitamin C to get the job done is yet not higher than 70mg (!) of ascorbic acid and almost certainly dependent (if not solely brought about) by the presence of phenols, flavones, and terpenes in the corresponding foods.



      Bottom line: The examples of vitamin C and beta carotene show that our understanding of the complex interaction of chemicals with the ability to influence our health through epigenetic changes or the prevention of the latter is still limited. For the latter, which have been around for decades, we already know not one, but rather a mixture - and in that, a mixture at the right ratios - is necessary to see actual benefits.

      "Does the Usefulness of Vitamin E Supplementation Depend on Your Activity level?" - Hitherto largely overlooked are the complex interactions of exercise and nutrient induced epigenetic changes, which may well determine the usefulness of antioxidant supplements (learn more)
      That being said, the combination of gene essays, in-vitro, in vivo and epidemiological science under the beneath the rood of "nutrigenomics" must be considered one of the most promising research directions of the future. At the moment it's results are yet about as preliminary as the various definitions you will find, when you look around in the scientific community.

      Most importantly, however, most of the reasonably reliable results this comparatively new branch of research has and is producing is simply confirming the stuff you've been learning on SHR and the SuppVersity about diet and nutrition over the past years and you can take my word for it: this is not going to go change much in the future.

      References:
      • Choi, Sang-Woon, Friso S. Epigenetics: A New Bridge between Nutritionand Health. Adv Nutr 2010;1: 8–16.
      • Fujii T.M.M., Medeiros R., Yamada R. Nutrigenomics and nutrigenetics: important concepts for the nutrition science. J Brazilian Soc Food Nutr 2010;35(1): 149-166.
      • Kromhout D. Essential micronutrients in relation to carcinogenesis. Am J Clin Nutr May 1987;45(5):1361-1367
      • Milner JA, Romagnolo DF. Nutrition and Health: Bioactive Compounds and Cancer. Humana Press. 2010.
      • Nepomuceno, J.C. Nutrigenomics and Cancer Prevention. In: Cancer Treatment - Conventional and Innovative Approaches. Rangel, L. (ed.). InTech. 2013.
      • Tanaka T, Shnimizu M, Moriwaki H. Cancer Chemoprevention by Carotenoids, Molecules 2012;17: 3202-3242.

      Exercise OR Calorie Restriction? Is This a Valid Question? Differential Epigenetics of Exercise and Calorie Restriction Suggest Otherwise.

      It is beyond me, why the war between proponents of exercise based and calorie reduction based approaches to weight loss are still raging. As a faithful "student" of the SuppVersity, you know that I have always been recommending a combination of both for improved body composition, well-being and general health and was pretty angry, when Gary Taubes claimed in the course of Dr. Oz's ridiculous dissertation on the dangers of low carb diets, that exercise would only stimulate hunger and would thus fail to produce a beneficial effect on weight loss and related health problems (cf. video 1, below). A group of researchers (Karrie. 2011) from the Department of Nutritional Sciences at the University of Texas have now conducted a research study that may well shed some light onto what exactly (in this case this means on a epigenetic level) happens in the course of calorie restriction and/or exercise induced weight loss...
      Video 1: Gary Taubes on Dr. Oz' show talking about the futility of exercise.
      (Dr. Oz, official homepage)
      Karrie, et al. had analyzed adipose gene expression in 48 female diet-induced obesity (DIO) mice in response to 8 weeks of either and ad-libitum fed CONTROL diet, a 30% calorically reduced regimen (CR), a treadmill exercise regimen (EX, with ad-libitum control diet), or  a continuation of the hypercaloric high fat diet (DIO) which made the mice fat in the first place (before the start of the experiment). What the scientists found is quite interesting and - at first sight - appear to rectify Taubes' skepticism with regards to exercise:
      Relative to the DIO controls, both CR and EX reduced adiposity by 35–40% and serum leptin levels by 80%, but only CR increased adiponectin and insulin sensitivity.
      Meaning visible improvements in terms of body fat were almost identical (cf. fig. 1), while favorable metabolic changes in the areas of  the hunger / satiety, insulin and leptin regulating peptide, as well as insulin sensitivity on the receptor level, occurred only in consequence to a reduction in caloric intake beyond maintenance.
      Figure 1: Body weight and composition changes after 6 weeks on different diet / exercise protocols.
      (data adapted from Karrie. 2011)
      Only a few days ago I reported similar results, i.e. no effects of exercise alone on insulin sensitivity in the Layne study.  Other than Layne et al., whose primary focus was on m-TOR and AMPK responses in muscle tissue, the study at hand provides additional data on the differences in the epigenetic responses to calorie restriction, on the one, and exercise, on the other hand, which may well explain the (disappointing) observations:
      Gene expression microarray analysis of visceral white adipose tissue revealed 209 genes responsive to both CR and EX, relative to the DIO group.  However, CR uniquely altered expression of an additional 496 genes, whereas only 20 were uniquely affected by EXOf the genes distinctly responsive to CR, 17 related to carbohydrate metabolism and glucose transport, including glucose transporter (GLUT) 4.
      What this means is that both exercise, as well as calorie reduction, have 209 gene responses in common (probably responsible for the similar effects on weight loss); yet, additional 496 genes are modulated exclusively by calorie restriction and among these are 17, of which we already know that they are related to carbohydrate metabolism and glucose transport. It is thus suggesting itself to speculate that these genes are the ones, responsible for the beneficial effects on insulin sensitivity, which could not be observed in the exercise only group.

      So, was Gary Taubes right, afterall? No. While it may be that exercise alone is not capable to upregulate insulin sensitivity its benefits on overall health, weight loss and above all weight maintenance have been so well established that it would be outrageous to question the advice any sensible nutritional counselor will provide his overweight clients with: Eat healthy (high protein, low / moderate carb, enough fat, whole foods, etc.), and moderately reduce your calorie intake, and begin an exercise regimen that is demanding, but not overcharging. Eventually, when this program has become a habit and the habit becomes a lifestyle, you can be certain that you are never going to be "the biggest loser" again.